SCODA-processed example datasets
Processed examples
- Browse example single-cell datasets processed with SCODA, explore their UMAP annotations, and download either the analysis report or the complete results archive (including the report).
- The SCODA-processed datasets are subsampled from publicly available datasets, most of which were obtained from GEO and the Single Cell Portal.
- The reports on this page were automatically generated by SCODiA.
| Dataset | Tissue | Species | Cells / genes | Conditions | UMAP | Downloads |
|---|---|---|---|---|---|---|
| GSE161529 | Breast | human | 33,742 / 22,585 | ER+,HER2+,Normal,TNBC ER+=6,HER2+=5,Normal=6,TNBC=6 | ||
| GSE132465 | Colon | human | 32,660 / 22,103 | Adj_normal,Tumor Adj_normal=10,Tumor=23 | ||
| GSE131907 | Lung | human | 36,374 / 21,575 | Normal,Tumor(adv),Tumor(early) Normal=11,Tumor(adv)=4,Tumor(early)=11 | ||
| GSE155698 | Pancreas | human | 31,245 / 23,239 | Adj_normal,PDAC Adj_normal=3,PDAC=16 |
UMAP preview ยท GSE161529
Breast
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